论著情况（按时间倒序排序）

  • 近年以第一作者及/责任作者或从作者在演化生物学国际主流期刊Proc. Royal Soc. B、MPE、BMC Evol. Biol., Frontier系列Front. Mar. Sci.、Front Microbiol., Microorganisms, 原生动物主流期刊Zool. J. Linn. Soc-Lond. & Eur. J. Protistol. & J. Eukaryot. Microbiol.及国内顶流期刊Sci. China Life Sci.等发表学术论文35篇。
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    SCI论文

    1. Tian Wang, Linger Lu, Cuiming Sun, Tao Li, Yan Zhao, Bing Ni, Xinpeng Fan*. Multigene phylogeny and expanded morphological comparison reveal one new lineage and finer differentiation in the order Peniculida (Alveolata: Ciliophora). 2024, Zoological Journal of the Linnean Society, zlae028.
    2. Xue Zhang, Yan Zhao(共同一作), Weibo Zheng, Bei Nan, Jinyu Fu, Yu Qiao, Rebecca A. Zufall, Feng Gao and Ying Yan*. Genome-wide identification of ATP-binding cassette transporter B subfamily, focusing on its structure, evolution and rearrangement in ciliates. 2023, Open Biology, 13(10): 230111.
    3. Chunyu Lian, Yan Zhao, Ping Li, Tengteng Zhang, Khaled A.S. Al-Rasheid, Naomi A. Stover, Yurui Wang*, Chen Shao*. Three closely-related subclasses Phacodiniidia Small & Lynn, 1985, Protohypotrichia Shi et al., 1999, and Euplotia Jankowski, 1979 (Protista, Ciliophora): a new contribution to their phylogeny with reconsiderations on the evolutionary hypotheses. 2023, Molecular Phylogenetics and Evolution, 189:107936.
    4. Yan Zhao*(通讯作者), Gaytha A. Langlois. Ciliate Morpho-Taxonomy and practical considerations before deploying metabarcoding to ciliate community diversity surveys in urban receiving waters. 2022, Microorganisms, 10: 2512.
    5. Changyu Zhu, Gaytha A. Langlois, Yan Zhao*(通讯作者). Effect of environmental heterogeneity and trophic status in sampling strategy on estimation of small-scale regional biodiversity of microorganisms. 2022, Microorganisms, 10: 2119.
    6. Gong Zhang, Yan Zhao, Yong Chi, Alan Warren, Hongbo Pan*, Weibo Song. Updating the phylogeny and taxonomy of pleurostomatid ciliates (Protista: Ciliophora) with establishment of a new family, a new genus and two new species. 2022, Zoological Journal of the Linnean Society, 196: 105–123.
    7. Rong Zhu, Qi Zhang, Lan Tang, Yan ZhaoRong Zhu, Qi Zhang, Lan Tang, Yan Zhao, Jingbao Li* and Fengchao Li*. Redescription of Bakuella (Bakuella) marina Agamaliev and Alekperov, 1976 (Protozoa, Hypotrichia), with notes on its morphology, morphogenesis, and molecular phylogeny. 2022, Frontiers in Microbiology, 12: 774226-774226.
    8. Gongaote Zhang, Yong Chi, Zhe Wang,Ya Wang,Ran Liu, Alan Warren, Yan Zhao*(通讯作者), Hongbo Pan*. Taxonomic and phylogenetic studies on two new freshwater Amphileptus species (Ciliophora, Pleurostomatida), from Lake Weishan, northern China. 2022, European Journal of Protistology, 82: 125854.
    9. Yong Chi, Zhe Wang, Borong Lu, Honggang Ma, Changjun Mu, Alan Warren,Yan Zhao*(通讯作者). Taxonomy and phylogeny of the dileptid ciliate genus Paradileptus (Protista: Ciliophora), with a brief review and redescriptions of two species isolated from a wetland in northern China. 2021, Frontiers in Microbiology, 12:709566.
    10. Ning Huang, Shuai Chen, Ming He, Qi Song, Lina Hou, Yan Zhao*(通讯作者), Shuo Zhao* and Miao Miao*. Molecular Evolutionary Analyses of Euplotes Species Living in Freshwater and Marine Habitats: A Mitogenomic Perspective. 2021, Frontiers in Marine Science, 8: 265.
    11. Xinpeng Fan*, Shunli Yao, Xiaotian Luo, Tianyao Dong, Yuan Xu, Lingyun Chen, William Bourland, Yan Zhao, Jie Huang*. Some morphologically distinguishable hypotrich ciliates share identical 18S rRNA gene sequences – taxonomic insights from a case study on Oxytricha species (Protista, Ciliophora). 2021, Zoological Journal of the Linnean Society, 193: 356–379.
    12. Wenya Song, Tengteng Zhang, Xue Zhang, Alan Warren, Weibo Song, Yan Zhao*(通讯作者), Xiaotian Luo*. Taxonomy, ontogenesis and evolutionary relationships of the algae-bearing Ciliate Bourlandella viridis (Kahl, 1932) comb. nov., with establishment of a new genus and new gamily (Protista, Ciliophora, Hypotrichia). 2021, Frontiers in Microbiology, 11: 3643.
    13. Jingyi Wang, Yan Zhao(共同一作), Xiaoteng Lu, Zhao Lyu, Alan Warren, Chen Shao*. Does the Gonostomum-patterned oral apparatus in hypotrichia carry a phylogenetic signal? Evidence from morphological and molecular data based on extended taxon sampling using three nuclear genes (Ciliophora, Spirotrichea). 2021, Science China Life Science, 64: 311–322.
    14. Jiyang Ma, Yan Zhao(共同一作), Tengyue Zhang, Chen Shao*, Khaled A S AL-Rasheid, Weibo Song. Cell-division pattern and phylogenetic position of a new ciliate genus Parasincirrang (Protista, Ciliophora, Hypotrichia), with report of a new soil species, P. sinica n. sp. found from northwest China. 2021, BMC Ecology and Evolution, 21: 21.
    15. Lingyun Chen, Jingyi Dong, Yuanyuan Xin, Alan Warren, Yingzhi Ning*, Yan Zhao*(通讯作者) . Morphology and Molecular Phylogeny of a New Hypotrich Ciliate, Anteholosticha songi nov. spec. from Motuo Virgin Foreset, Tibet, and an American Population of Holosticha pullaster (Muller, 1773) Foissner et al., 1991 (Ciliophora, Hypotricha). 2020, European Journal of Protistology, 72: 125646.
    16. Yang Bai, Rui Wang, Weiwei Liu , Alan Warren, Yan Zhao*(通讯作者) , Xiaozhong Hu*. Redescriptions of three tintinnine ciliates (Ciliophora: Tintinnina) from coastal waters in China based on lorica features, cell morphology, and rDNA sequence data. 2020, European Journal of Protistology, 72: 125659.
    17. Chunyu Lian, Xiaotian Luo, Yan Zhao*(通讯作者), Jiamei Jiang*. Morphology and SSU rDNA-based phylogeny of four spirotrich species (Ciliophora, Spirotrichea) from China, with emphasis on two new marine ciliates. 2020, European Journal of Protistology, 72: 125663.
    18. Wenxin Xu, Yan Zhao (共同一作), Bo Pan, Yongqiang Liu, Yuan Li, William A. Bourland, Xinghao Li, Xiaotian Luo. Morphology, Morphogenesis, and Phylogeny of Urosoma caudata (Ehrenberg, 1833) Berger, 1999 (Ciliophora,Hypotrichia) based on a Chinese Population. 2020, Journal of Eukaryotic Microbiology, 67 (1): 76-85.
    19. Kaihui Lu, Weiwei Liu, Alan Warren, Yusen Xu, Changyu Zhu, Yan Zhao, Zhenzhen Yi*. Diversity of oligotrich ciliates (Ciliophora, Spirotrichea) in northern coastal waters of the South China Sea revealed by LSU rDNA sequences. 2019, Journal of Oceanology and Limnology, 38: 156–167.
    20. Yongqiang Liu, Chao Li, Yuan li, Mingjian Liu, Yan Zhao*(通讯作者). A Simple and rapid cryopreservation technique for ciliates: A long‐term storage procedure used for the marine Scuticociliates. 2019, Journal of Eukaryotic Microbiology, 66 (5): 836-848.
    21. Xuefen Lu, Eleni Gentekaki, Yiwei Xu, Lijuan Huang, Yunyi Li, Xiaotong Lu, Yan Zhao, Xiaofeng Lin, Zhenzhen Yi*. Intra-population genetic diversity and its effects on outlining genetic diversity of ciliate populations: using Paramecium multimicronucleatum as an example. 2019, European Journal of Protistology, 67: 142–150.
    22. Yan Zhao*(通讯作者), Zhenzhen Yi*, Alan Warren, Weibo Song. Species delimitation for the molecular taxonomy and ecology of the widely distributed microbial eukaryote genus Euplotes (Alveolata, Ciliophora). 2018, Proceedings of the Royal Society B: Biological Sciences, 285(1871): 20172159.
    23. Yuzhan Yang, Yangchun Gao, Xuena Huang, Ping Ni, Xiong Wei, Yan Zhao, Aibin Zhan*. Geographical distribution of zooplankton biodiversity in highly polluted running water ecosystems: validation of fine-scale species sorting hypothesis. 2018, Ecology and Evolution, 8: 4830-4840.
    24. Feng Gao, Jie Huang, Yan Zhao(共同一作), Liqiong Li, Weiwei Liu, Miao Miao, Qianqian Zhang, Jiqiu Li, Zhenzhen Yi *, Hamed A. El-Serehy, Alan Warren, Weibo Song. Systematic studies on ciliates (Alveolata, Ciliophora) in China: progress and achievements based on molecular information. 2017, European Journal of Protistology, 61 (part B): 409–42.
    25. Chuanliang Pu, Haitao Li, Yiyong Chen, Yan Zhao, Aibin Zhan*, Phylogeography in Nassarius mud snails: Complex patterns in congeneric species. 2017, PLoS One, 12(7): e0180728.
    26. Yan Zhao, Zhenzhen Yi*, Eleni Gentekaki, Aibin Zhan, Saleh A. Al-Farraj & Weibo Song. Utility of combining morphological characters, nuclear and mitochondrial genes: An attempt to resolve the conflicts of species identification for ciliated protists. 2016, Molecular Phylogenetics and Evolution, 94 (B): 718-729.
    27. Changsen Sun, Yan Zhao, Haitao Li, Yanhong Dong, Hugh J. MacIsaac, Aibin Zhan*. Unreliable quantitation of species abundance based on high-thoughput sequencing data of zooplankton communities. 2015, Aquatic Biology, 24: 9-15.
    28. Ying Chen, Yan Zhao(共同一作), Xuming Pan, Wenqiao Ding, Khaled Al-Rasheid A. S., Zijian Qiu*. Morphology and phylogeny of a new Frontonia ciliate, F. paramagna spec. nov. (Ciliophora, Peniculida) from Harbin, Northeast China. 2014, Zootaxa, 3827(3): 375-386.
    29. Ping Ni, Yaping Lin, Yiyong Chen, Haitao Li, Yan Zhao, Aibin Zhan*. Development and characterization of 16 polymorphic microsatellite markers for the highly invasive ascidian, Ciona savignyi. 2014, Conservation Genetics Resources, 7(1): 207-209.
    30. Yan Zhao, Eleni Gentekaki, Zhenzhen Yi*, Xiaofeng Lin. Genetic differentiation of the mitochondrial cytochrome oxidase c subunit I gene in genus Paramecium (Protista, Ciliophora). 2013, PLoS One, 8(10): e77044.
    31. Xiangrui Chen, Yan Zhao, Saleh Al-Farraj A., Saleh Al-Quraishy A., El-Serehy Hamed A., Chen Shao, Khaled Al-Rasheid A. S.*. Taxonomic descriptions of two marine ciliates, Euplotes dammamensis n. sp. and Euplotes balteatus (Dujardin, 1841) Kahl, 1932 (Ciliophora, Spirotrichea, Euplotida), collected from the Arabian Gulf, Saudi Arabia. 2013, Acta Protozoologica, 52(2): 73-87..
    32. Yan Zhao, Feng Gao, Jiqiu Li, Zhenzhen Yi *, Alan Warren. Phylogenetic analyses on the tintinnid ciliates (Protozoa, Ciliophora) based on multigene sequence data. 2012, Acta Protozoologica, 51(4): 319-328.

    中文核心论文

    1. 胡晓钟, 赵研(共同一作) , 黄洁, 高凤, 高珊, 邵晨, 宋微波*. 进展中的纤毛虫学研究：新拓展、新窗口与新版图. 2019, 中国海洋大学学报, 49(10):028-042.
    2. 宋积文, 董艳红, 李海涛, 赵研*(通讯作者). 中国近海入侵贝类及其影响. 2015, 生物安全学报, 24(3): 177-183.
    3. 赵研, 范鑫鹏, 许媛, 胡晓钟, 马洪钢*. 八种海洋盾纤类纤毛虫的形态学研究. 2011, 水生生物学报, 35(6): 929-939.

    专著情况

    1. 参编中国科学院大学研究生教材系列《生态基因组学》一书（康乐主编）